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  • Home
  • Articles
    • Latest Articles
    • Special Issues
    • COVID-19 Special Collection
    • Editor's Picks
    • Special Series: Sponsored Minireviews and Video Abstracts
    • Archive
  • Topics
    • Applied and Environmental Science
    • Ecological and Evolutionary Science
    • Host-Microbe Biology
    • Molecular Biology and Physiology
    • Novel Systems Biology Techniques
    • Early-Career Systems Microbiology Perspectives
  • For Authors
    • Getting Started
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
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Latest Articles

  • It Takes a Village: Microbial Communities Thrive through Interactions and Metabolic Handoffs
    Special Issue Perspective | Applied and Environmental Science
    It Takes a Village: Microbial Communities Thrive through Interactions and Metabolic Handoffs

    An enduring theme in microbial ecology is the interdependence of microbial community members. Interactions between community members include provision of cofactors, establishment of redox gradients, and turnover of key nutrients to drive biogeochemical cycles.

    Laura A. Hug, Rebecca Co
    13 Mar 2018
  • Unraveling Interactions between the Microbiome and the Host Immune System To Decipher Mechanisms of Disease
    Special Issue Perspective | Host-Microbe Biology
    Unraveling Interactions between the Microbiome and the Host Immune System To Decipher Mechanisms of Disease

    In recent years, there has been a deluge of papers linking altered microbiome compositions to a myriad of diseases. Mechanistic insight into microbial drivers of disease phenotypes is essential for translation to novel therapies.

    Catherine A. Lozupone
    6 Mar 2018
  • Computational Genomics of Specialized Metabolism: from Natural Product Discovery to Microbiome Ecology
    Special Issue Perspective | Novel Systems Biology Techniques
    Computational Genomics of Specialized Metabolism: from Natural Product Discovery to Microbiome Ecology

    Microbial and plant specialized metabolites, also known as natural products, are key mediators of microbe-microbe and host-microbe interactions and constitute a rich resource for drug development. In the past decade, genome mining has emerged as a prominent strategy for natural product discovery.

    Marnix H. Medema
    6 Mar 2018
  • Beyond Structure: Defining the Function of the Gut Using Omic Approaches for Rational Design of Personalized Therapeutics
    Special Issue Perspective | Therapeutics and Prevention
    Beyond Structure: Defining the Function of the Gut Using Omic Approaches for Rational Design of Personalized Therapeutics

    Over the past 10 years, microbiome research has focused on defining the structures associated with different disease states in multiple systems, but has fallen short on showing causation. Prior omic studies have generated many new hypotheses, but moving forward we need to start dissecting the function of each bacterium alone and in concert with complex bacterial communities in well-characterized systems.

    Casey M. Theriot
    6 Mar 2018
  • Metabolomics and Agriculture: What Can Be Done?
    Special Issue Perspective | Host-Microbe Biology
    Metabolomics and Agriculture: What Can Be Done?

    The importance of Brazil as a producer and exporter of food and feed will continuously increase. Despite the recent economic and political problems in Brazil, the scientific field is expanding.

    Rodolpho Martin do Prado, Carla Porto, Estela Nunes, Claudio Lima de Aguiar, Eduardo Jorge Pilau
    6 Mar 2018
  • Making Millennial Medicine More Meta
    Special Issue Perspective | Host-Microbe Biology
    Making Millennial Medicine More Meta

    Although the importance of human genetic polymorphisms in therapeutic outcomes is well established, the role of specific genotypic or copy number variants in our “second genome” (the microbiome) has been largely overlooked. In this Perspective, I will discuss three major barriers to integrating metagenomics into pharmacology, highlighting ongoing research by us and others that has begun to shed light on the mechanisms that link the...

    Peter J. Turnbaugh
    6 Mar 2018
  • Spatial Analyses of Specialized Metabolites: The Key to Studying Function in Hosts
    Special Issue Perspective | Host-Microbe Biology
    Spatial Analyses of Specialized Metabolites: The Key to Studying Function in Hosts

    Microbial communities contribute to a wide variety of biological functions in hosts and have the ability to specifically influence the health of those organisms through production of specialized metabolites. However, the structures or molecular mechanisms related to health or disease in host-microbe interactions represent a knowledge gap.

    Melissa M. Galey, Laura M. Sanchez
    6 Mar 2018
  • A Microbial Perspective on the Grand Challenges in Comparative Animal Physiology
    Special Issue Perspective | Host-Microbe Biology
    A Microbial Perspective on the Grand Challenges in Comparative Animal Physiology

    Interactions with microbial communities can have profound influences on animal physiology, thereby impacting animal performance and fitness. Therefore, it is important to understand the diversity and nature of host-microbe interactions in various animal groups (invertebrates, fish, amphibians, reptiles, birds, and mammals).

    Kevin D. Kohl
    6 Mar 2018
  • Conflict of Interest Declarations by Contributing Editors of the Special Issue on Early-Career Systems Microbiology Scientists, Sponsored by Janssen Human Microbiome Institute (JHMI)
    Special Issue Editorial
    Conflict of Interest Declarations by Contributing Editors of the Special Issue on Early-Career Systems Microbiology Scientists, Sponsored by Janssen Human Microbiome Institute (JHMI)
    6 Mar 2018
  • Early-Career Systems Microbiology Scientists
    Special Issue Editorial
    Early-Career Systems Microbiology Scientists
    Jack A. Gilbert
    6 Mar 2018

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