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symbiosis

  • Open Access
    The <em>Vibrio</em>-Squid Symbiosis as a Model for Studying Interbacterial Competition
    Special Issue Perspective | Host-Microbe Biology
    The Vibrio-Squid Symbiosis as a Model for Studying Interbacterial Competition

    The symbiosis between Euprymna scolopes squid and its bioluminescent bacterial symbiont, Vibrio fischeri, is a valuable model system to study a natural, coevolved host-microbe association. Over the past 30 years, researchers have developed and optimized many experimental methods to study both...

    Alecia N. Septer
  • Open Access
    The Significance of Microbial Symbionts in Ecosystem Processes
    Special Issue Perspective | Host-Microbe Biology
    The Significance of Microbial Symbionts in Ecosystem Processes

    It is increasingly accepted that the microbial symbionts of eukaryotes can have profound effects on host ecology and evolution. However, the relative contribution that they make directly to ecosystem processes, like energy and nutrient flows, is less explicitly acknowledged and, in many cases, only poorly constrained.

    Roxanne A. Beinart
  • Open Access
    Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities
    Special Issue Perspective | Host-Microbe Biology
    Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities

    Metaproteomics is the large-scale identification and quantification of proteins from microbial communities and thus provides direct insight into the phenotypes of microorganisms on the molecular level. Initially, metaproteomics was mainly used to assess the “expressed” metabolism and physiology of microbial community members.

    Manuel Kleiner
  • Open Access
    Life at Home and on the Roam: Genomic Adaptions Reflect the Dual Lifestyle of an Intracellular, Facultative Symbiont
    Editor's Pick Research Article | Host-Microbe Biology
    Life at Home and on the Roam: Genomic Adaptions Reflect the Dual Lifestyle of an Intracellular, Facultative Symbiont

    Given the evolutionary position of sponges as one of the earliest phyla to depart from the metazoan stem lineage, studies on their distinct and exceptionally diverse microbial communities should yield a better understanding of the origin of animal-bacterium interactions. While genomes of several extracellular sponge symbionts have been published, the intracellular symbionts have, so far, been elusive. Here we compare the genomes of two...

    Ilia Burgsdorf, Kim M. Handley, Rinat Bar-Shalom, Patrick M. Erwin, Laura Steindler
  • Open Access
    Clonal Plants as Meta-Holobionts
    Opinion/Hypothesis | Host-Microbe Biology
    Clonal Plants as Meta-Holobionts

    The holobiont concept defines a given organism and its associated symbionts as a potential level of selection over evolutionary time. In clonal plants, recent experiments demonstrated vertical transmission of part of the microbiota from one ramet (i.e., potentially autonomous individual) to another within the clonal network (i.e., connections by modified stems present in ∼35% of all plants).

    Nathan Vannier, Cendrine Mony, Anne-Kristel Bittebiere, Kevin R. Theis, Eugene Rosenberg, Philippe Vandenkoornhuyse
  • Open Access
    The Life Aquatic at the Microscale
    Special Issue Perspective | Host-Microbe Biology
    The Life Aquatic at the Microscale

    There are more than one million microbial cells in every drop of seawater, and their collective metabolisms not only recycle nutrients that can then be used by larger organisms but also catalyze key chemical transformations that maintain Earth’s habitability. Understanding how these microbes interact with each other and with multicellular hosts is critical to reliably quantify any functional aspect of their metabolisms and to predicting...

    Jean-Baptiste Raina
  • Open Access
    Microbiomes <em>In Natura</em>: Importance of Invertebrates in Understanding the Natural Variety of Animal-Microbe Interactions
    Special Issue Perspective | Host-Microbe Biology
    Microbiomes In Natura: Importance of Invertebrates in Understanding the Natural Variety of Animal-Microbe Interactions

    Animals evolved in a world teeming with microbes, which play pivotal roles in their health, development, and evolution. Although the overwhelming majority of living animals are invertebrates, the minority of “microbiome” studies focus on this group.

    Jillian M. Petersen, Jay Osvatic
  • Open Access
    The Who, Why, and How of Small-Molecule Production in Invertebrate Microbiomes: Basic Insights Fueling Drug Discovery
    Special Issue Perspective | Host-Microbe Biology
    The Who, Why, and How of Small-Molecule Production in Invertebrate Microbiomes: Basic Insights Fueling Drug Discovery

    Bacteria have supplied us with many bioactive molecules for use in medicine and agriculture. However, rates of discovery have decreased as the biosynthetic capacity of the culturable biosphere has been continuously mined for many decades.

    Jason C. Kwan
  • Open Access
    Increased Biosynthetic Gene Dosage in a Genome-Reduced Defensive Bacterial Symbiont
    Research Article | Host-Microbe Biology
    Increased Biosynthetic Gene Dosage in a Genome-Reduced Defensive Bacterial Symbiont

    Secondary metabolites, which are small-molecule organic compounds produced by living organisms, provide or inspire drugs for many different diseases. These natural products have evolved over millions of years to provide a survival benefit to the producing organism and often display potent biological activity with important therapeutic applications. For instance, defensive compounds in the environment may be cytotoxic to eukaryotic cells...

    Juan Lopera, Ian J. Miller, Kerry L. McPhail, Jason C. Kwan
  • Open Access
    Total Lipopolysaccharide from the Human Gut Microbiome Silences Toll-Like Receptor Signaling
    Research Article | Host-Microbe Biology
    Total Lipopolysaccharide from the Human Gut Microbiome Silences Toll-Like Receptor Signaling

    While the ability for humans to host a complex microbial ecosystem is an essential property of life, the mechanisms allowing for immune tolerance of such a large microbial load are not completely understood and are currently the focus of intense research. This study shows that an important proinflammatory pathway that is commonly triggered by pathogenic bacteria upon interaction with the host is, in fact, actively repressed by the...

    Eva d’Hennezel, Sahar Abubucker, Leon O. Murphy, Thomas W. Cullen

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