TABLE 2

Genomic characteristics of the six genomes investigated in detaila

Class/clade
and SAG/binb
Taxon IDCRISPRANKSecondary metabolite gene cluster
CRISPRfinder total
(no. of repeats
per spacer)
IMG
total
Type 1
PKS
TerpeneOther
Anaerolineae
    SAG 1B2617270794--1---
    A154*2619619053--2---
Caldilineae
    C141*26196190517 (27, 24, 13, 7, 3, 30, 4)992--
    C174*26196190555 (21, 24, 8, 32, 27)81-1-
SAR202
    S152*26196190525 (7, 34, 26, 7, 4)95341
    S156*26196190541 (13)32121
  • a The absolute numbers of CRISPR arrays defined by CRISPRfinder and IMG, the number of ankyrins and ankyrin repeat-containing proteins (ANK), as well as the number of secondary metabolite (antiSMASH) gene clusters per genome are shown. The IMG Gold Study IDs are Gs0114494 and Gs0099546. Secondary metabolite clusters were found using antiSMASH 3.0; the values are total numbers of genes per genome.

  • b Asterisks on bins indicate extracted metagenome bins from IMG Gold Study ID Gs0099546. The letters of the bins reflect the phylogenetic identity of the bin (A for Anaerolineae, C for Caldilineae, and S for SAR202).