TABLE 4

Summary of ChIPseq analysis of the B. pertussis BvgA regulator

TABLE 4
  • a Putative promoter region located between two ORFs orientated in opposite directions.

  • b Region not annotated in the B. pertussis Tohama I BX470248 genome.

  • c Within annotated ORF of the B. pertussis Tohama I BX470248 genome.

  • d Within annotated ORF and close to the 5′ end of an adjacent ORF.

  • e vags presenting a Log2FC of less than −2 in the RNAseq analysis.

  • f vags presenting a Log2FC between −1.5 and −2 in the RNAseq analysis.

  • g vrgs presenting a Log2FC of >2 in the RNAseq analysis and were described by Coutte et al. (3).

  • h RisA-regulated gene, bp1022, codes for the transcriptional activator FlbB, described by Coutte et al. (3).

  • i Bvgi corresponds to bipA, not regulated by modulation under the conditions tested here but requires BvgA.

  • j Regions not annotated in the B. pertussis Tohama I BX470248 genome.

  • k Gene not regulated as vag or vrg in this RNAseq analysis.