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Research Article | Applied and Environmental Science

RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids

Taylor K. Dunivin, Jinlyung Choi, Adina Howe, Ashley Shade
Thomas J. Sharpton, Editor
Taylor K. Dunivin
aDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA
bEnvironmental and Integrative Toxicological Sciences, Michigan State University, East Lansing, Michigan, USA
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Jinlyung Choi
cDepartment of Agricultural and Biosystems Engineering, Iowa State University, Ames, Iowa, USA
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Adina Howe
cDepartment of Agricultural and Biosystems Engineering, Iowa State University, Ames, Iowa, USA
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Ashley Shade
aDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA
dDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, Michigan, USA
eProgram in Ecology, Evolutionary Biology and Behavior, Michigan State University, East Lansing, Michigan, USA
fPlant Resilience Institute, Michigan State University, East Lansing, Michigan, USA
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Thomas J. Sharpton
Oregon State University
Roles: Editor
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DOI: 10.1128/mSystems.00349-18
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Article Information

DOI 
https://doi.org/10.1128/mSystems.00349-18

Published By 
American Society for Microbiology Journals
History 
  • Received January 3, 2019
  • Accepted January 29, 2019
  • Published online February 26, 2019.

Copyright & Usage 
Copyright © 2019 Dunivin et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.
Editors and / or Reviewers 
  • Thomas J. Sharpton, Editor, Oregon State University

Author Information

  1. Taylor K. Dunivina,b,
  2. Jinlyung Choic,
  3. Adina Howec and
  4. Ashley Shadea,d,e,f
  1. aDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA
  2. bEnvironmental and Integrative Toxicological Sciences, Michigan State University, East Lansing, Michigan, USA
  3. cDepartment of Agricultural and Biosystems Engineering, Iowa State University, Ames, Iowa, USA
  4. dDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, Michigan, USA
  5. eProgram in Ecology, Evolutionary Biology and Behavior, Michigan State University, East Lansing, Michigan, USA
  6. fPlant Resilience Institute, Michigan State University, East Lansing, Michigan, USA
  • Address correspondence to Ashley Shade, shadeash{at}msu.edu.
  • Citation Dunivin TK, Choi J, Howe A, Shade A. 2019. RefSoil+: a reference database for genes and traits of soil plasmids. mSystems 4:e00349-18. https://doi.org/10.1128/mSystems.00349-18.

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RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids
Taylor K. Dunivin, Jinlyung Choi, Adina Howe, Ashley Shade
mSystems Feb 2019, 4 (1) e00349-18; DOI: 10.1128/mSystems.00349-18

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RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids
Taylor K. Dunivin, Jinlyung Choi, Adina Howe, Ashley Shade
mSystems Feb 2019, 4 (1) e00349-18; DOI: 10.1128/mSystems.00349-18
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KEYWORDS

antibiotic resistance genes
database
isolates
metagenomics
microbial ecology
microbiome dynamics
one health
plasmid
soil microbiology
targeted gene assembly

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