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Editor's Pick Research Article | Host-Microbe Biology

Qualitative and Quantitative DNA- and RNA-Based Analysis of the Bacterial Stomach Microbiota in Humans, Mice, and Gerbils

Philipp Wurm, Elisabeth Dörner, Christina Kremer, Julia Spranger, Cynthia Maddox, Bettina Halwachs, Ute Harrison, Thomas Blanchard, Rainer Haas, Christoph Högenauer, Gregor Gorkiewicz, W. Florian Fricke
Peter J. Turnbaugh, Editor
Philipp Wurm
aInstitute of Pathology, Medical University Graz, Graz, Austria
bTheodor Escherich Laboratory for Medical Microbiome Research, Medical University of Graz, Graz, Austria
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Elisabeth Dörner
cUniversität Hohenheim, Stuttgart, Germany
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Christina Kremer
cUniversität Hohenheim, Stuttgart, Germany
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Julia Spranger
cUniversität Hohenheim, Stuttgart, Germany
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Cynthia Maddox
cUniversität Hohenheim, Stuttgart, Germany
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Bettina Halwachs
aInstitute of Pathology, Medical University Graz, Graz, Austria
bTheodor Escherich Laboratory for Medical Microbiome Research, Medical University of Graz, Graz, Austria
dBioTechMed Interuniversity Cooperation, Graz, Austria
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Ute Harrison
eMax von Pettenkofer-Institut, Ludwig-Maximilians-Universität München, Munich, Germany
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Thomas Blanchard
fDivision of Gastroenterology and Hepatology, Department of Internal Medicine, Medical University of Graz, Graz, Austria
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Rainer Haas
eMax von Pettenkofer-Institut, Ludwig-Maximilians-Universität München, Munich, Germany
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Christoph Högenauer
bTheodor Escherich Laboratory for Medical Microbiome Research, Medical University of Graz, Graz, Austria
dBioTechMed Interuniversity Cooperation, Graz, Austria
gDepartment of Pediatrics, University of Maryland School of Medicine, Baltimore, Maryland, USA
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Gregor Gorkiewicz
aInstitute of Pathology, Medical University Graz, Graz, Austria
bTheodor Escherich Laboratory for Medical Microbiome Research, Medical University of Graz, Graz, Austria
dBioTechMed Interuniversity Cooperation, Graz, Austria
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W. Florian Fricke
cUniversität Hohenheim, Stuttgart, Germany
hInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA
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  • ORCID record for W. Florian Fricke
Peter J. Turnbaugh
University of California, San Francisco
Roles: Editor
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DOI: 10.1128/mSystems.00262-18
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Article Information

DOI 
https://doi.org/10.1128/mSystems.00262-18

Published By 
American Society for Microbiology Journals
History 
  • Received October 16, 2018
  • Accepted October 30, 2018
  • Published online November 20, 2018.

Copyright & Usage 
Copyright © 2018 Wurm et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.
Editors and / or Reviewers 
  • Peter J. Turnbaugh, Editor, University of California, San Francisco

Author Information

  1. Philipp Wurma,b,
  2. Elisabeth Dörnerc,
  3. Christina Kremerc,
  4. Julia Sprangerc,
  5. Cynthia Maddoxc,
  6. Bettina Halwachsa,b,d,
  7. Ute Harrisone,
  8. Thomas Blanchardf,
  9. Rainer Haase,
  10. Christoph Högenauerb,d,g,
  11. Gregor Gorkiewicza,b,d and
  12. W. Florian Frickec,h
  1. aInstitute of Pathology, Medical University Graz, Graz, Austria
  2. bTheodor Escherich Laboratory for Medical Microbiome Research, Medical University of Graz, Graz, Austria
  3. cUniversität Hohenheim, Stuttgart, Germany
  4. dBioTechMed Interuniversity Cooperation, Graz, Austria
  5. eMax von Pettenkofer-Institut, Ludwig-Maximilians-Universität München, Munich, Germany
  6. fDivision of Gastroenterology and Hepatology, Department of Internal Medicine, Medical University of Graz, Graz, Austria
  7. gDepartment of Pediatrics, University of Maryland School of Medicine, Baltimore, Maryland, USA
  8. hInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA
  • Address correspondence to W. Florian Fricke, w.florian.fricke{at}uni-hohenheim.de.
  • G.G. and W.F.F. contributed equally to this article.

  • Citation Wurm P, Dörner E, Kremer C, Spranger J, Maddox C, Halwachs B, Harrison U, Blanchard T, Haas R, Högenauer C, Gorkiewicz G, Fricke WF. 2018. Qualitative and quantitative DNA- and RNA-based analysis of the bacterial stomach microbiota in humans, mice, and gerbils. mSystems 3:e00262-18. https://doi.org/10.1128/mSystems.00262-18.

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Qualitative and Quantitative DNA- and RNA-Based Analysis of the Bacterial Stomach Microbiota in Humans, Mice, and Gerbils
Philipp Wurm, Elisabeth Dörner, Christina Kremer, Julia Spranger, Cynthia Maddox, Bettina Halwachs, Ute Harrison, Thomas Blanchard, Rainer Haas, Christoph Högenauer, Gregor Gorkiewicz, W. Florian Fricke
mSystems Nov 2018, 3 (6) e00262-18; DOI: 10.1128/mSystems.00262-18

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Qualitative and Quantitative DNA- and RNA-Based Analysis of the Bacterial Stomach Microbiota in Humans, Mice, and Gerbils
Philipp Wurm, Elisabeth Dörner, Christina Kremer, Julia Spranger, Cynthia Maddox, Bettina Halwachs, Ute Harrison, Thomas Blanchard, Rainer Haas, Christoph Högenauer, Gregor Gorkiewicz, W. Florian Fricke
mSystems Nov 2018, 3 (6) e00262-18; DOI: 10.1128/mSystems.00262-18
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KEYWORDS

16S rRNA
absolute abundance
quantitative microbiota analysis
stomach microbiota
transcriptional activity

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