DOI: 10.1128/mSystems.00031-18
Article Information
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History
- Received March 8, 2018
- Accepted April 16, 2018
- Published online May 15, 2018.
Copyright & Usage
Copyright © 2018 McDonald et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.
Editors and / or Reviewers
- Casey S. Greene, Editor, University of Pennsylvania
Author Information
- Daniel McDonalda,
- Embriette Hydea,
- Justine W. Debeliusa,
- James T. Mortona,
- Antonio Gonzaleza,
- Gail Ackermanna,
- Alexander A. Aksenovb,c,
- Bahar Behsazd,
- Caitriona Brennana,
- Yingfeng Chene,
- Lindsay DeRight Goldasicha,
- Pieter C. Dorresteinb,c,
- Robert R. Dunnf,
- Ashkaan K. Fahimipourg,
- James Gaffneya,
- Jack A. Gilberth,i,j,k,
- Grant Gogula,
- Jessica L. Greeng,
- Philip Hugenholtzl,
- Greg Humphreya,
- Curtis Huttenhowerm,n,
- Matthew A. Jacksono,
- Stefan Janssena,
- Dilip V. Jestep,q,
- Lingjing Jianga,
- Scott T. Kelleye,
- Dan Knightsr,s,
- Tomasz Koscioleka,
- Joshua Ladaut,
- Jeff Leachu,
- Clarisse Marotza,
- Dmitry Meleshkov,
- Alexey V. Melnikb,c,
- Jessica L. Metcalfw,
- Hosein Mohimanix,
- Emmanuel Montassierr,y,
- Jose Navas-Molinaa,
- Tanya T. Nguyenp,q,
- Shyamal Peddadaz,
- Pavel Pevznerb,d,aa,
- Katherine S. Pollardt,
- Gholamali Rahnavardm,n,
- Adam Robbins-Piankabb,
- Naseer Sangwanj,
- Joshua Shorensteina,
- Larry Smarrd,aa,cc,
- Se Jin Songa,
- Timothy Spectoro,
- Austin D. Swaffordaa,
- Varykina G. Thackraydd,
- Luke R. Thompsonee,ff,
- Anupriya Tripathia,
- Yoshiki Vázquez-Baezaa,
- Alison Vrbanaca,
- Paul Wischmeyergg,hh,
- Elaine Wolfea,
- Qiyun Zhua,
- The American Gut Consortium and
- Rob Knighta,d,aa
- aDepartment of Pediatrics, University of California San Diego, La Jolla, California, USA
- bCollaborative Mass Spectrometry Innovation Center, University of California, San Diego, La Jolla, California, USA
- cSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, California, USA
- dDepartment of Computer Science and Engineering, University of California, San Diego, La Jolla, California, USA
- eDepartment of Biology, San Diego State University, San Diego, California, USA
- fDepartment of Applied Ecology, North Carolina State University, Raleigh, North Carolina, USA
- gBiology and the Built Environment Center, University of Oregon, Eugene, Oregon, USA
- hDepartment of Surgery, University of Chicago, Chicago, Illinois, USA
- iInstitute for Genomic and Systems Biology, University of Chicago, Chicago, Illinois, USA
- jDepartment of Biosciences, Argonne National Laboratory, Chicago, Illinois, USA
- kMarine Biology Laboratory, University of Chicago, Chicago, Illinois, USA
- lAustralian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, the University of Queensland, Brisbane, QLD, Australia
- mHarvard T. H. Chan School of Public Health, Boston, Massachusetts, USA
- nThe Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA
- oDepartment of Twin Research and Genetic Epidemiology, King’s College London, London, United Kingdom
- pDepartments of Psychiatry and Neurosciences, University of California San Diego, La Jolla, California, USA
- qSam and Rose Stein Institute for Research on Aging and Center for Healthy Aging, University of California San Diego, La Jolla, California, USA
- rDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota, USA
- sBiotechnology Institute, University of Minnesota, Minneapolis, Minnesota, USA
- tThe Gladstone Institutes, University of California, San Francisco, California, USA
- uHuman Food Project, Terlingua, Texas, USA
- vSt. Petersburg State University, Center for Algorithmic Biotechnology, Saint Petersburg, Russia
- wDepartment of Animal Science, Colorado State University, Fort Collins, Colorado, USA
- xDepartment of Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA
- yUniversité de Nantes, Microbiotas Hosts Antibiotics and Bacterial Resistances (MiHAR), Nantes, France
- zDepartment of Biostatistics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
- aaCenter for Microbiome Innovation, University of California, San Diego, La Jolla, California, USA
- bbDepartment of Computer Science, University of Colorado Boulder, Boulder, Colorado, USA
- ccCalifornia Institute for Telecommunications and Information Technology (Calit2), University of California San Diego, La Jolla, California, USA
- ddDepartment of Obstetrics, Gynecology and Reproductive Sciences, University of California San Diego, La Jolla, California, USA
- eeOcean Chemistry and Ecosystems Division, Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, stationed at Southwest Fisheries Science Center, La Jolla, California, USA
- ffDepartment of Biological Sciences and Northern Gulf Institute, University of Southern Mississippi, Hattiesburg, Mississippi, USA
- ggDepartment of Anesthesiology and Surgery, Duke University School of Medicine, Durham, North Carolina, USA
- hhDuke Clinical Research Institute, Duke University School of Medicine, Durham, North Carolina, USA
- Address correspondence to Rob Knight, robknight{at}ucsd.edu.
D. McDonald and E. Hyde contributed equally to this work.
Citation McDonald D, Hyde E, Debelius JW, Morton JT, Gonzalez A, Ackermann G, Aksenov AA, Behsaz B, Brennan C, Chen Y, DeRight Goldasich L, Dorrestein PC, Dunn RR, Fahimipour AK, Gaffney J, Gilbert JA, Gogul G, Green JL, Hugenholtz P, Humphrey G, Huttenhower C, Jackson MA, Janssen S, Jeste DV, Jiang L, Kelley ST, Knights D, Kosciolek T, Ladau J, Leach J, Marotz C, Meleshko D, Melnik AV, Metcalf JL, Mohimani H, Montassier E, Navas-Molina J, Nguyen TT, Peddada S, Pevzner P, Pollard KS, Rahnavard G, Robbins-Pianka A, Sangwan N, Shorenstein J, Smarr L, Song SJ, Spector T, Swafford AD, Thackray VG, Thompson LR, Tripathi A, Vázquez-Baeza Y, Vrbanac A, Wischmeyer P, Wolfe E, Zhu Q, The American Gut Consortium, Knight R. 2018. American Gut: an open platform for citizen science microbiome research. mSystems 3:e00031-18. https://doi.org/10.1128/mSystems.00031-18.
