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Special Issue Perspective | Ecological and Evolutionary Science

Seven Billion Microcosms: Evolution within Human Microbiomes

Tami D. Lieberman
Tami D. Lieberman
aInstitute for Medical Engineering and Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
bDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
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DOI: 10.1128/mSystems.00171-17
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ABSTRACT

Rational microbiome-based therapies may one day treat a wide range of diseases and promote wellness. Yet, we are still limited in our abilities to employ such therapies and to predict which bacterial strains have the potential to stably colonize a person. The Lieberman laboratory is working to close this knowledge gap and to develop an understanding of how individual species and strains behave in the human microbiome, including with regard to their niche ranges, survival strategies, and the degree to which they adapt to individual people. We employ system-level approaches, with a particular emphasis on using de novo mutations and evolutionary inference to reconstruct the history of bacterial lineages within individuals.

mSystems® vol. 3, no. 2, is a special issue sponsored by Janssen Human Microbiome Institute (JHMI).

  • Copyright © 2018 Lieberman.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

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Seven Billion Microcosms: Evolution within Human Microbiomes
Tami D. Lieberman
mSystems Mar 2018, 3 (2) e00171-17; DOI: 10.1128/mSystems.00171-17

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Seven Billion Microcosms: Evolution within Human Microbiomes
Tami D. Lieberman
mSystems Mar 2018, 3 (2) e00171-17; DOI: 10.1128/mSystems.00171-17
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  • Article
    • ABSTRACT
    • PERSPECTIVE
    • EVOLUTION IN THE MICROBIOME AND ITS IMPACT ON HUMAN HEALTH
    • RAPID EVOLUTION FOR STUDYING HUMAN MICROBIOMES
    • HUMAN MICROBIOMES FOR STUDYING RAPID ADAPTATION
    • CULTURE-BASED APPROACHES ENABLE A TYPE OF “SINGLE-CELL” ANALYSIS
    • EXCITING TIME FOR STUDYING WITHIN-PERSON EVOLUTION IN THE MICROBIOME
    • FOOTNOTES
    • REFERENCES
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KEYWORDS

evolution
human microbiome
microbial ecology
within-person evolution
evolutionary biology
genomics
intestinal colonization

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