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Research Article | Novel Systems Biology Techniques

Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota

Eric J. de Muinck, Knut E. A. Lundin, Pål Trosvik
Morgan G. I. Langille, Editor
Eric J. de Muinck
a Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
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Knut E. A. Lundin
b Department of Gastroenterology, Oslo University Hospital–Rikshospitalet, Oslo, Norway
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Pål Trosvik
a Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
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Morgan G. I. Langille
Dalhousie University
Roles: Editor
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DOI: 10.1128/mSystems.00086-17
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Article Information

DOI 
https://doi.org/10.1128/mSystems.00086-17
PubMed 
28904999

Published By 
American Society for Microbiology Journals
History 
  • Received July 24, 2017
  • Accepted August 2, 2017
  • Published online September 5, 2017.

Copyright & Usage 
Copyright © 2017 de Muinck et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license .
Editors and / or Reviewers 
  • Morgan G. I. Langille, Editor, Dalhousie University

Author Information

  1. Eric J. de Muincka,
  2. Knut E. A. Lundinb and
  3. Pål Trosvika
  1. a Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
  2. b Department of Gastroenterology, Oslo University Hospital–Rikshospitalet, Oslo, Norway
  • Address correspondence to Eric J. de Muinck, ericdemuinck{at}gmail.com.
  • Citation de Muinck EJ, Lundin KEA, Trosvik P. 2017. Linking spatial structure and community-level biotic interactions through cooccurrence and time series modeling of the human intestinal microbiota. mSystems 2:e00086-17. https://doi.org/10.1128/mSystems.00086-17 .

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Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota
Eric J. de Muinck, Knut E. A. Lundin, Pål Trosvik
mSystems Sep 2017, 2 (5) e00086-17; DOI: 10.1128/mSystems.00086-17

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Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota
Eric J. de Muinck, Knut E. A. Lundin, Pål Trosvik
mSystems Sep 2017, 2 (5) e00086-17; DOI: 10.1128/mSystems.00086-17
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KEYWORDS

16S rRNA gene
microbiome
biotic interactions
intestine
microbial ecology
spatial structure
time series

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