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Host-Microbe Biology

  • Open Access
    Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylation in <span class="named-content genus-species" id="named-content-1">Candida albicans</span>
    Research Article | Host-Microbe Biology
    Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylation in Candida albicans

    C. albicans is one of the most commonly reported fungal pathogens in mucosal and systemic infections. A better understanding of its growth habits and metabolic processes in the host should help improve defense strategies.

    Hailin Zheng, Nana Song, Xiaowei Zhou, Huan Mei, Dongmei Li, Xiaofang Li, Weida Liu
  • Open Access
    Essential Amino Acid Enrichment and Positive Selection Highlight Endosymbiont's Role in a Global Virus-Vectoring Pest
    Editor's Pick Research Article | Host-Microbe Biology
    Essential Amino Acid Enrichment and Positive Selection Highlight Endosymbiont's Role in a Global Virus-Vectoring Pest

    Xiphinematobacter spp. are distinctly evolved intracellular symbionts in the phylum Verrucomicrobia, which includes the important human gut-associated microbe Akkermansia muciniphila and many highly abundant free-living soil microbes. Like Akkermansia sp., Xiphinematobacter sp. is obligately associated with the gut of its hosts,...

    Kaitlyn N. Myers, Daniel Conn, Amanda M. V. Brown
  • Open Access
    Consumption of Dietary Fiber from Different Sources during Pregnancy Alters Sow Gut Microbiota and Improves Performance and Reduces Inflammation in Sows and Piglets
    Research Article | Host-Microbe Biology
    Consumption of Dietary Fiber from Different Sources during Pregnancy Alters Sow Gut Microbiota and Improves Performance and Reduces Inflammation in Sows and Piglets

    Although the direct effects of dietary fiber on gut microbiota composition have been studied extensively, systematic evaluation of different fiber sources on gut health and inflammatory responses of sows and their offspring has rarely been conducted. Excessive reactive oxygen species produced by overactive metabolic processes during late pregnancy and lactation of sows leads to increased endotoxin levels, disordered gut microbiota,...

    Boshuai Liu, Xiaoyan Zhu, Yalei Cui, Wenjing Wang, Hua Liu, Zidan Li, Zhiguo Guo, Sen Ma, Defeng Li, Chengzhang Wang, Yinghua Shi
  • Open Access
    Pangenome Analytics Reveal Two-Component Systems as Conserved Targets in ESKAPEE Pathogens
    Research Article | Host-Microbe Biology
    Pangenome Analytics Reveal Two-Component Systems as Conserved Targets in ESKAPEE Pathogens

    The ESKAPEE pathogens are the leading cause of health care-associated infections worldwide. Two-component systems (TCSs) can be used as effective targets against pathogenic bacteria since they are ubiquitous and manage various vital functions such as antibiotic resistance, virulence, biofilms, quorum sensing, and pH balance, among others.

    Akanksha Rajput, Yara Seif, Kumari Sonal Choudhary, Christopher Dalldorf, Saugat Poudel, Jonathan M. Monk, Bernhard O. Palsson
  • Open Access
    Associations of Genetic Variants Contributing to Gut Microbiota Composition in Immunoglobin A Nephropathy
    Research Article | Host-Microbe Biology
    Associations of Genetic Variants Contributing to Gut Microbiota Composition in Immunoglobin A Nephropathy

    The gut microbiota and host genetics are implicated in the pathogenesis of IgAN. Recent studies have confirmed that microbial compositions are heritable (microbiome quantitative trait loci [QTL]).

    Jia-Wei He, Xu-Jie Zhou, Ya-Feng Li, Yan-Na Wang, Li-Jun Liu, Su-Fang Shi, Xiao-Hong Xin, Rong-Shan Li, Mario Falchi, Ji-Cheng Lv, Hong Zhang
  • Open Access
    FADU: a Quantification Tool for Prokaryotic Transcriptomic Analyses
    Research Article | Host-Microbe Biology
    FADU: a Quantification Tool for Prokaryotic Transcriptomic Analyses

    Most currently available quantification tools for transcriptomics analyses have been designed for human data sets, in which full-length transcript sequences, including the untranslated regions, are well annotated. In most prokaryotic systems, full-length transcript sequences have yet to be characterized, leading to prokaryotic transcriptomics analyses being performed based on only the coding sequences.

    Matthew Chung, Ricky S. Adkins, John S. A. Mattick, Katie R. Bradwell, Amol C. Shetty, Lisa Sadzewicz, Luke J. Tallon, Claire M. Fraser, David A. Rasko, Anup Mahurkar, Julie C. Dunning Hotopp
  • Open Access
    <em>Candida</em> Administration Worsens Uremia-Induced Gut Leakage in Bilateral Nephrectomy Mice, an Impact of Gut Fungi and Organismal Molecules in Uremia
    Research Article | Host-Microbe Biology
    Candida Administration Worsens Uremia-Induced Gut Leakage in Bilateral Nephrectomy Mice, an Impact of Gut Fungi and Organismal Molecules in Uremia

    The impact of fungi in the intestine on acute uremia was demonstrated by the oral administration of Candida albicans in mice with the removal of both kidneys. Because fungi in the mouse intestine are less abundant than in humans, a Candida-administered mouse model has more resemblance to patient conditions.

    Wimonrat Panpetch, Chitrasak Kullapanich, Cong Phi Dang, Peerapat Visitchanakun, Wilasinee Saisorn, Jutamas Wongphoom, Dhammika Leshan Wannigama, Arthid Thim-uam, Kanitha Patarakul, Naraporn Somboonna, Somying Tumwasorn, Asada Leelahavanichkul
  • Open Access
    Nonadditive Transcriptomic Signatures of Genotype-by-Genotype Interactions during the Initiation of Plant-Rhizobium Symbiosis
    Research Article | Host-Microbe Biology
    Nonadditive Transcriptomic Signatures of Genotype-by-Genotype Interactions during the Initiation of Plant-Rhizobium Symbiosis

    A sustainable way for meeting the need of an increased global food demand should be based on a holobiont perspective, viewing crop plants as intimately associated with their microbiome, which helps improve plant nutrition, tolerance to pests, and adverse climate conditions. However, the genetic repertoire needed for efficient association with plants by the microbial symbionts is still poorly understood.

    Camilla Fagorzi, Giovanni Bacci, Rui Huang, Lisa Cangioli, Alice Checcucci, Margherita Fini, Elena Perrin, Chiara Natali, George Colin diCenzo, Alessio Mengoni
  • Open Access
    Heritable Gut Microbiome Associated with <em>Salmonella enterica</em> Serovar Pullorum Infection in Chickens
    Research Article | Host-Microbe Biology
    Heritable Gut Microbiome Associated with Salmonella enterica Serovar Pullorum Infection in Chickens

    The present study investigated the association among the host genome, the gut microbiome, and S. Pullorum infection in chickens. The results suggested that the gut microbial structure is altered in S. Pullorum-infected chickens.

    Jinmei Ding, Hao Zhou, Lingxiao Luo, Lu Xiao, Kaixuan Yang, Lingyu Yang, Yuming Zheng, Ke Xu, Chuan He, Chengxiao Han, Huaixi Luo, Chao Qin, Fisayo T. Akinyemi, Caiju Gu, Zhenxiang Zhou, Qizhong Huang, He Meng
  • Open Access
    Metabolic Interactions between <em>Brachypodium</em> and <span class="named-content genus-species" id="named-content-1">Pseudomonas fluorescens</span> under Controlled Iron-Limited Conditions
    Research Article | Host-Microbe Biology
    Metabolic Interactions between Brachypodium and Pseudomonas fluorescens under Controlled Iron-Limited Conditions

    Rhizosphere bacteria influence the growth of their host plant by consuming and producing metabolites, nutrients, and antibiotic compounds within the root system that affect plant metabolism. Under Fe-limited growth conditions, different plant and microbial species have distinct Fe acquisition strategies, often involving the secretion of strong Fe-binding chelators that scavenge Fe and facilitate uptake.

    Rene M. Boiteau, Lye Meng Markillie, David W. Hoyt, Dehong Hu, Rosalie K. Chu, Hugh D. Mitchell, Ljiljana Pasa-Tolic, Janet K. Jansson, Christer Jansson

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